Protein structural motifs that play a role in protein-protein binding. a SKP DOMAIN PROTEIN, a CULLIN DOMAIN PROTEIN and a F-BOX DOMAIN PROTEIN.

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CD-Search is NCBI's interface to searching the Conserved Domain Database with protein or nucleotide query sequences. It uses RPS-BLAST , a variant of PSI-BLAST, to quickly scan a set of pre-calculated position-specific scoring matrices ( PSSMs ) with a protein query. InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites. We combine protein signatures from a number of member databases into a single searchable resource, capitalising on their individual strengths to produce a powerful integrated database and diagnostic tool. InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites.

Domain protein search

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To search for Interpro Databse Matches in proteins from Rice Genome Annotation Project database select the chromosome you wish to view and the Interpro Database/Method Using the Protein Search. TAIR's Protein search allow you to search for proteins with a variety of parameters. You can perform a simple search by name, restrict your search to proteins having specific physio-chemial properties and domains,as well as limiting your search to proteins encoded in specified regions of the genome. Protein knowledgebase. UniParc. Sequence archive.

Text search Our basic text search allows you to search all the resources available. BLAST Find regions of similarity between your sequences.

InterPro provides functional analysis of proteins by classifying them into families and predicting domains and important sites. We combine protein signatures from a number of member databases into a single searchable resource, capitalising on their individual strengths to produce a powerful integrated database and diagnostic tool.

These are not true families or proteins, because the domains within each one are not as similar to each other as members of manually curated families and proteins. For example, assignment to an "automated matches" family means the domain could reliably be assigned to the parent superfamily, but could not be automatically assigned to one of the existing families with 100% confidence.

Search results for PH Domain protein at Sigma-Aldrich. Species Human (23035) , Species Mouse (244650) , Species Rat (498949) , Species naked mole-rat (101699656) , Species Domestic Rabbit (100356030) , Species domestic guinea pig (100729093) , Species cow (533130) , Species sheep (101104420) , Species Zebrafish (100101638) , Species Horse (100054529) , Species domestic cat (101080345

Domain protein search

The Protein database is a collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB. Protein sequences are the fundamental determinants of biological structure and function.

Domain protein search

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Domain protein search

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Can anyone suggest a tool to find out whether the proteins have any common domain ? Search for: These are a collection of protein pattern and domain database sites. [ info] PROSITE [  Search for multiple sequence alignments and phylogenetic trees covering many common protein domains.
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We describe the Conserved Domain Search service (CD-Search), a web-based tool for the detection of structural and functional domains in protein sequences. CD-Search uses BLAST(R) heuristics to provide a fast, interactive service, and searches a comprehensive collection of domain models. Search resul …

Click Help to find out more information on this search. 2004-07-01 The domains in pyruvate kinase are well separated from each other and have different fold. The top domain on the figure above is a β-sheet domain, while the other two are of alpha/beta type (see the respective Proteopedia page for details). In most organisms the functional unit of these two proteins is tetrameric (contains 4 subunits).


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Matched Interpro Protein Families, Domains and Functional Sites. To search for Interpro Databse Matches in proteins from Rice Genome Annotation Project database select the chromosome you wish to view and the Interpro Database/Method

Another  service for protein structure prediction, protein sequence analysis, protein function prediction, protein sequence alignments, bioinformatics. In molecular biology, YadA is a protein domain which is short for Yersinia adhesin A. These proteins have strong sequence and structural homology, particularly  The conventional method used for inferring functional annotations for uncharacterised proteins is a sequence or structure homology search of a query protein  Explore the landscape of alternative protein consumer brands, manufacturers, and ingredient suppliers. Use the database to stay up-to-date on new companies   2017年12月12日 Helix-loop-helix DNA-binding domainを含むタンパク質を表示する; 3分27秒 4. を名前/系統樹/BLAST配列から指定しリガンドを探すTarget Search機能 2013- 06-06RCSB PDB(Protein Data Bank)はタンパク質の立体構造  Check your website's DA or the page authority (PA) of individual pages you're building links to.